Chakraborty N, Gautam A, Muhie S, Miller SA, Moyler C, et al. The responses of lungs and adjacent lymph nodes in responding to Yersinia pestis infection: A transcriptomic study using a non-human primate model. PLOS ONE 14(2): e0209592.

Gautam A, Muhie S, Chakraborty N, et al. Metabolomic analyses reveal lipid abnormalities and hepatic dysfunction in non-human primate model for Yersinia pestis. Metabolomics. 2018;15(1):2.

Williams JR, Yang R, Clifford JL, et al. Functional Heatmap: an automated and interactive pattern recognition tool to integrate time with multi-omics assays. BMC Bioinformatics. 2019;20(1):81. Published 2019 Feb 15. doi:10.1186/s12859-019-2657-0.


Alkhalil, A., Carney, B.C., Travis, T.E., Muhie, S., Miller, S.A., Ramella-Roman, J.C., Ghassemi, P., Hammamieh, R., Jett, M., Moffatt, L.T. and Shupp, J.W.. Key Cell Functions are Modulated by Compression in an Animal Model of Hypertrophic Scar. Wounds 30, 353-362.

Arcidiacono S, Soares JW, Philip Karl J, Chrisey L, Dancy CPTBCR, Goodson M, Gregory F, Hammamieh R, Loughnane NK, Kokoska R, Riddle CAPTM, Whitaker K, Racicot K. The current state and future direction of DoD gut microbiome research: a summary of the first DoD gut microbiome informational meeting. Standards in Genomic Sciences. 2018;13(1):5. doi: 10.1186/s40793-018-0308-0.

Chakraborty N, Cheema A, Gautam A, Donohue D, Hoke A, Conley C, Jett M, Hammamieh R. Gene-metabolite profile integration to understand the cause of spaceflight induced immunodeficiency. npj Microgravity 4(1):4.

Childress P, Brinker A, Gong C-MS, Harris J, Olivos DJ, Rytlewski JD, Scofield DC, Choi SY, Shirazi-Fard Y, McKinley TO, Chu T-MG, Conley CL, Chakraborty N, Hammamieh R, Kacena MA. Forces associated with launch into space do not impact bone fracture healing. Life Sciences in Space Research 16:52-62.

Gautam A, Kumar R, Chakraborty N, Muhie S, Hoke A, Hammamieh R, Jett M. Altered fecal microbiota composition in all male aggressor-exposed rodent model simulating features of post-traumatic stress disorder. . Journal of neuroscience research. 2018. Epub 2018/04/11. doi: 10.1002/jnr.24229. PubMed PMID: 29633335.

Getnet, D., Gautam, A., Kumar, R., Hoke, A., Cheema, A.K., Rossetti, F., Schultz, C.R., Hammamieh, R., Lumley, L.A. and Jett, M.. Poisoning with Soman, an Organophosphorus Nerve Agent, Alters Fecal Bacterial Biota and Urine Metabolites: a Case for Novel Signatures for Asymptomatic Nerve Agent Exposure. Applied and Environmental Microbiology 84, e00978-18.

Shupp, J.W., Brummel-Ziedins, K.E., Cohen, M.J., Freeman, K., Hammamieh, R., Mudunuri, U.S., Orfeo, T., Moffatt, L.T., Brownstein, B.H., Mann, K.G., Jett, M. and Pusateri, A.E.. Military Supplement: Assessment of Coagulation Homeostasis in Blunt, Penetrating, and Thermal Trauma Guidance for a Multi-Center Systems Biology Approach. Shock Publish Ahead of Print.

Synthia H. Mellon, Aarti Gautam, Rasha Hammamieh, Marti Jett, Owen M. Wolkowitz. Metabolism, Metabolomics, and Inflammation in Posttraumatic Stress Disorder. Biological Psychiatry, Volume 83, Issue 10, 2018, Pages 866-875, ISSN 0006-3223.

Verhoeven, J.E., Yang, R., Wolkowitz, O.M., Bersani, F.S., Lindqvist, D., Mellon, S.H., Yehuda, R., Flory, J.D., Lin, J., Abu-Amara, D., Makotkine, I., Marmar, C., Jett, M., Hammamieh, R. Epigenetic age in male combat-exposed war veterans: Associations with posttraumatic stress disorder status. Molecular Neuropsychiatry, 2018 Sept; 4:102-111. DOI: 10.1159/000491431.

Yang, R., Watson, D., Williams, J., Kumar, R., Campbell, R., Mudunuri, U., Hammamieh, R. and Jett, M.. PanoromiX: a time-course network medicine platform integrating molecular assays and pathophenotypic data. BMC Bioinformatics 19, 458.


Bradburne, C., Lewis, J.A.. Personalizing Environmental Health: At the intersection of precision medicine and occupational health in the military. Journal of Occupational and Environmental Medicine. 59(11): e209-e214, November 2017.

Chakraborty, N. Muhie S, Kumar R, Gautam A, Srinivasan S, Sowe B, Dimitrov G, Miller SA, Jett M and Hammamieh R. Contributions of polyunsaturated fatty acids (PUFA) on cerebral neurobiology: an integrated omics approach with epigenomic focus. Journal of Nutritional Biochemistry 2017 42: 84-94.

Chakraborty, N., Meyerhoff, J., Jett, M. & Hammamieh, R. Genome to Phenome: A Systems Biology Approach to PTSD Using an Animal Model. In Kobeissy, F.H. & Stevens, J.S.M. (eds), Neuroproteomics: Methods and Protocols. Springer New York, New York, NY, pp. 117-154.

Clifford JL, Christy RJ, and Cheppudira BP. Antinociceptive effects of pluronic lecithin organo (PLO)-opioid gels in rats with thermal injury. Burns, in press.

Fischer JP, Wininger AE, Himes E, Chakraborty N, Hammamieh R, Kacena MA. Fixation of whole mouse hindlimbs using NASA spaceflight fixation kit. Journal of Histotechnology 40(4):115-120.

Flory JD, Donohue D, Muhie S, Yang R, Miller SA, Hammamieh R, Ryberg K, Yehuda R. Gene expression associated with suicide attempts in US veterans. Transl Psychiatry. 2017 Sep 5;7(9):e1226. doi: 10.1038/tp.2017.179.

Hammamieh, R., Chakraborty, N., Gautam, A., Muhie, S., Yang, R., Donohue, D., Kumar, R., Daigle Jr, B.J., Zhang, Y., Amara, D.A., Miller, S.A., Srinivasan, S., Flory, J., Yehuda, R., Petzold, L., Wolkowitz, O.M., Mellon, S.H., Hood, L., Doyle Iii, F.J., Marmar, C. & Jett, M. Whole-genome DNA methylation status associated with clinical PTSD measures of OIF/OEF veterans. Transl Psychiatry, 7, e1169.

J Philip Karl, Lee M Margolis, Elisabeth H Madslien, Nancy E Murphy, Christopher T Carrigan, John W Castellani, Yngvar Gundersen, Pål Stenberg, Hilde K Teien, Allison Hoke, Michael Levangie, Raina Kumar, Nabarun Chakraborty, Aarti Gautam, Rasha Hammamieh, James P McClung, Svein Martini, Scott J Montain, Stefan M Pasiakos. Changes in intestinal microbiota composition and metabolism coincide with increased intestinal permeability in young adults under prolonged physiologic stress. Am J Physiol Gastrointest Liver Physiol. 2017 Mar 23:ajpgi.00066.2017. doi: 10.1152/ajpgi.00066.2017. [Epub ahead of print].

Muhie, S., Gautam, A., Chakraborty, N., Hoke, A., Meyerhoff, J., Hammamieh, R. & Jett, M. Molecular indicators of stress-induced neuroinflammation in a mouse model simulating features of post-traumatic stress disorder. Transl Psychiatry, 7, e1135.

Patterson, S.L., Dancy, B.C.R., Ippolito, D.L., Stallings, J.D.. Potential and actual health hazards in the dense urban operational environment: Critical gaps and solutions for military occupational and environmental medicine. Journal of Occupational and Environmental Medicine. 59(11): e197-e203, November 2017.

Young, C., Ippolito, D.L.. Far-forward diagnostics in toxic industrial chemical and material exposure scenarios and biomarker identification. Journal of Occupational and Environmental Medicine. 59(11): e204-e208, November 2017.


Brennan, L. M., Widder, M. W., McAleer, M. K., Mayo, M. W., Greis, A. P., van der Schalie, W. H.. Preparation and Testing of Impedance-based Fluidic Biochips with RTgill-W1 Cells for Rapid Evaluation of Drinking Water Samples for Toxicity. J. Vis. Exp. (109), e53555, doi:10.3791/53555 (2016).

Cheppudira BP, Trevino A, Petz LN, Christy RJ, and Clifford JL. Anti-nerve growth factor antibody attenuates chronic morphine treatment-induced tolerance in the rat. BMC Anesthesiology, 16:73, 2016.

Gautam A, Kumar R, Dimitrov G, Hoke A, Hammamieh R, Jett M. Identification of extracellular miRNA in archived serum samples by next-generation sequencing from RNA extracted using multiple methods. Mol Biol Rep. 2016 Aug 10 PubMed PMID 27510798.

Hammamieh R, Muhie S, Borschel R, Gautam A, Miller SA, Chakraborty N, Jett M. Temporal Progression of Pneumonic Plague in Blood of Nonhuman Primate: A Transcriptomic Analysis. PLoS One. 2016 Mar 22;11(3):e0151788.

Hunninghake JC, Skabelund AJ, Morris MJ. Chronic left lower lobe pulmonary infiltrates during military deployment. Military Medicine. 2016 Aug; 181(8):e955-8. (PMID:27483542).

Koontz JM, Kumsher DM, Kelly Iii R, Stallings JD. Effect of 2 Bedding Materials on Ammonia Levels in Individually Ventilated Cages. J Am Assoc Lab Anim Sci. 2016;55(1):25-8. PMID: 26817976.

Lee YS, Lewis JA, Ippolito DL, Hussainzada N, Lein PJ, Jackson DA, Stallings JD. Repeated exposure to neurotoxic levels of chlorpyrifos alters hippocampal expression of neurotrophins and neuropeptides. Toxicology. 2016 Jan 18;340:53-62. doi: 10.1016/j.tox.2016.01.001. Epub 2016 Jan 13. PMID: 26775027.

Loh GA, Bell DG, Morris MJ. Evaluation of pulmonary symptoms following military deployment. Current Pulmonology Reports. 2016 June; 5 (2)86-93.

McIntyre MK, Clifford JL, Maani CV, and Burmeister DM. Animal models of pain: implications for burn associated pain. Burns, 42:1161-1172, 2016.

Morris MJ, Rawlins FA, Forbes DA, Skabelund AJ, Lucero PF. Deployment-related Respiratory Issues. US Army Med Dep J. 2016 Apr-Sep; (2-16):173-8. PubMed PMID: 27215888.

Salas MM, Clifford JL, Hayden JR, Iadarola MJ, and Averitt DL. Local Resiniferatoxin Induces Long-Lasting Analgesia in a Rat Model of Full Thickness Thermal Injury. Pain Medicine, In press, 2016.

Sobieszczyk M, Perkins M, Cohee BM, Costantoth CB, Mabe DL, Liotta R, Abraham JH, Holley PR, Sherner J, Holley AB. Service members returning from Iraq or Afghanistan with respiratory complaints have a high prevalence of obstruction on spirometry. Respiratory Medicine 2016; 118: 84-87.


Bui-Nguyen TM, Baer CE, Lewis JA, Yang D, Lein PJ, Jackson DA. DA Dichlorvos exposure results in large scale disruption of energy metabolism in the liver of the zebrafish, Danio rerio. BMC Genomics. 2015 Oct 24;16(1):853. doi: 10.1186/s12864-015-1941-2.

Gautam A, D'Arpa P, Donohue DE, Muhie S, Chakraborty N, Luke BT, Grapov D, Carroll EE, Meyerhoff JL, Hammamieh R, Jett M. Acute and chronic plasma metabolomic and liver transcriptomic stress effects in a mouse model with features of post-traumatic stress disorder. PLoS One. 2015 Jan 28;10(1):e0117092. doi: 10.1371/journal.pone.0117092. eCollection 2015. PubMed PMID: 25629821; PubMed Central PMCID: PMC4309402.

Hammamieh R, Chakraborty N, Lin Y, Shupp JW, Miller SA, Morris S, Jett M. Characterization of the interaction of staphylococcal enterotoxin B with CD1d expressed in human renal proximal tubule epithelial cells. BMC Microbiol. 2015 Feb 4;15(1):12. doi: 10.1186/s12866-015-0344-5. PubMed PMID: 25649790; PubMed Central PMCID: PMC4327782.

Ippolito, D.L., AbdulHameed, M.D.M., G.J. Tawa, C.E. Baer, M.H. Boyle, M.A. Streicker, B.S. Snowden, J.A. Lewis, A. Wallqvist, and J.D. Stallings. Gene expression patterns associated with histopathology in toxic liver injury. Toxicol Sci. 149:67-88.

Madejczyk, M.S., C.E. Baer, W.E. Dennis, V.C. Minarchick, S.S. Leonard, D.A. Jackson, J.D. Stallings, and J.A. Lewis. Temporal Changes in Rat Liver Gene Expression after Acute Cadmium and Chromium Exposure. PLoS ONE 10:e127327.

Muhie S, Gautam A, Meyerhoff J, Chakraborty N, Hammamieh R, Jett M. Brain transcriptome profiles in mouse model simulating features of post-traumatic stress disorder. Mol Brain. 2015 Feb 28;8(1):14. doi: 10.1186/s13041-015-0104-3. PubMed PMID: 25888136; PubMed Central PMCID: PMC4359441.

Nabarun Chakraborty, James Meyerhoff, Aarti Gautam, Seid Muhie, Meskerem Jibitu, Thereza C. M. De Lima, Rasha Hammamieh and Marti Jett. Gene and Stress History Interplay in Emergence of PTSD-like Features. Behavioral Brain Research. 2015 Oct 1;292:266-77. doi: 10.1016/j.bbr.2015.05.038. Epub 2015 May 27.

Porter, KL, FHY Green, RA Harley, V Vallyathan, SS Leonard, V Castranova, NL Waldron, DE Nelson, JA Lewis, and DA Jackson. Evaluation of the pulmonary toxicity of ambient particulate matter from Camp Victory, Iraq. Journal of Toxicology and Environmental Health, Part A. 2015;78(23-24):1385-408. doi: 10.1080/15287394.2015.1072611. Epub 2015 Nov 23.

Stallings JD, DL Ippolito, A Wallqvist, J Reifman. Host Response to Environmental Hazards: Using literature, bioinformatics, and computation to derive candidate biomarkers of toxic industrial chemical exposure. . STO Meeting Proceedings STO-MP-HFM-254. 2015 October 12, pp. 7-1 to 7-14.

Thakur GS, Daigle BJ Jr, Dean KR, Zhang Y, Rodriguez-Fernandez M, Hammamieh R, Yang R, Jett M, Palma J, Petzold LR, Doyle Iii FJ. Systems biology approach to understanding post-traumatic stress disorder. Mol Biosyst. 2015 Mar 17;11(4):980-93. doi: 10.1039/c4mb00404c. PubMed PMID: 25627823.


AbdulHameed MDM, GJ Tawa, K Kumar, DL Ippolito, JA Lewis, JD Stallings and A Wallqvist. Systems level analysis and identification of pathways and networks associated with liver fibrosis. PLoS One Nov 7;9(11):e112193.

Baer CE, DL Ippolito, N Hussainzada, JA Lewis, DA Jackson and JD Stallings. Genome-wide gene expression profiling of acute metal exposures in male Zebrafish. Genomics Data. Dec;2:363-365.

Bui-Nguyen, T.M., W.E. Dennis, D.A. Jackson, J.D. Stallings and J.A. Lewis. Detection of dichlorvos adducts in a hepatocyte cell line. Proteome Research 13(8): 3583-95.

Bunch, K., D. Tinnemore, S. Huff, Z.S. Hoffer, R.O. Burney and J.D. Stallings. Expression patterns of progesterone receptor membrane components 1 and 2 in endometria from women with and without endometriosis. Reprod Sci 21(2): 190-197.

Chakraborty N, Gautam A, Muhie S, Miller SA, Jett M, Hammamieh R. An integrated omics analysis: impact of microgravity on host response to lipopolysaccharide in vitro. BMC Genomics. 2014 Aug 7;15:659. doi:10.1186/1471-2164-15-659. PubMed PMID: 25102863; PubMed Central PMCID:PMC4287545.

Cho JH, Lee I, Hammamieh R, Wang K, Baxter D, Scherler K, Etheridge A, Kulchenko A, Gautam A, Muhie S, Chakraborty N, Galas DJ, Jett M, Hood L. Molecular evidence of stress-induced acute heart injury in a mouse model simulating posttraumatic stress disorder. Proc Natl Acad Sci U S A. 2014 Feb 25;111(8):3188-93. doi: 10.1073/pnas.1400113111. Epub 2014 Feb 10. PubMed PMID:24516145; PubMed Central PMCID: PMC3939897.

Flood-Nichols, S.K., A.A. Kazanjian, D. Tinnemore, P.R. Gafken, Y. Ogata, P.G. Napolitano, J.D. Stallings and D.L. Ippolito. Aberrant glycosylation of plasma proteins in severe preeclampsoa promotes monocyte adhesion. Reprod Sci. 21(2):204-14.

Hammamieh R, Chakraborty N, Gautam A, Miller SA, Muhie S, Meyerhoff J, Jett M. Transcriptomic analysis of the effects of a fish oil enriched diet on murine brains. PLoS One. 2014 Mar 14;9(3):e90425. doi: 10.1371/journal.pone.0090425. eCollection 2014. PubMed PMID: 24632812; PubMed Central PMCID: PMC3954562.

Ippolito DL, CE Baer, WE Dennis, JA Lewis and JD Stallings. Alteration in circulating metabolites during and after heat stress in the conscious rat: Potential biomarkers of exposure and organ-specific injury. BMC Physiology Dec 24;14(1):14.

Kuempel ED, J Roberts, A Eastlake, A Stefaniak. Guidance on Nanomaterial Hazards and Risks. Draft report for USACEHR, with suggested modifications to the overall health risk assessment process for Army materiel. as described in ASTM E2552-08, NOV 2014.

Lassance-Soares RM, Sood S, Chakraborty N, Jhamnani S, Aghili N, Nashin H, Hammamieh R, Jett M, Epstein SE, Burnett MS. Chronic stress impairs collateral blood flow recovery in aged mice. J Cardiovasc Transl Res. 2014 Nov;7(8):749-55. doi: 10.1007/s12265-014-9592-2. Epub 2014 Oct 15. PubMed PMID: 25315467.

Rakesh V, JD Stallings and J Reifman. A virtual rat for simulating environmental and exertional heat stress. J Appl Physiol Dec 1;117(11):1278-86.

Stallings JD, DL Ippolito, V Rakesh, CE Baer, WE Dennis, BG Helwig, DA Jackson, LR Leon, JA Lewis and J Reifman. Patterns of gene expression associated with recovery and injury in heat-stressed rats. BMC Genomics Dec 3;15(1):1058.

Tawa, G.T., M.D.M. AbdulHameed, X. Yu, K. Kumar, D.L. Ippolito, J.A. Lewis, J.D. Stallings and A. Wallqvist. Characterization of chemically induced liver injuries using gene co-expression modules. PLoS One Sep 16;9(9): e107230.

Trader, D.E. and W.H. van der Schalie. An Evaluation of the NIDS® ACE™ Test. USACEHR TR-14-01, Defense Technical Information Center, ADA60398730, June 2014.

Widder, M.W., L.M. Brennan, E. A. Hanft, M.E. Schrock, R.R. James and W.H. van der Schalie. Evaluation and refinement of a field-portable drinking water toxicity sensor utilizing electric cell-substrate impedance sensing (ECIS) and a fluidic biochip. J of Appl Tox, Online: 18 Sep 2014, DOI: 10.1002/jat.3017.


Bunch K, Tinnemore D, Huff S, Hoffer ZS, Burney RO, Stallings JD. Expression Patterns of Progesterone Receptor Membrane Components 1 and 2 in Endometria From Women With and Without Endometriosis. Reprod Sci. 2013 Jun 21.

Chowbina S, Hammamieh R, Kumar R, Chakraborty N, Yang R, Mudunuri U, Jett M, Palma JM, Stephens R. SysBioCube: A Data Warehouse and Integrative Data Analysis Platform Facilitating Systems Biology Studies of Disorders of Military Relevance. AMIA Summits Transl Sci Proc. 2013 Mar 18;2013:34.

Curtis TM., Howard A, Gerlach BD, Brennan LM, Widder MW, van der Schalie WH Vo NTK, Bols NC. 2013. Suitability of invertebrate and vertebrate cells in a portable impedance-based toxicity sensor: temperature mediated impacts on long-term survival. Toxicol. In Vitro. 27(2013):2061-2066.

Curtis, T.M., A. Howard, B.D. Gerlach, L.M. Brennan, M.W. Widder, W.H. van der Schalie, N.T.K. Vo, and N.C. Bols. 2013. Suitability of invertebrate and vertebrate cells in a portable impedance-based toxicity sensor: temperature mediated impacts on long-term survival. Toxicol. In Vitro. 27(2013):2061-2066.

Flood-Nichols SK, Kazanjian AA, Tinnemore D, Gafken PR, Ogata Y, Napolitano PG, Stallings JD, Ippolito DL. Aberrant Glycosylation of Plasma Proteins in Severe Preeclampsia Promotes Monocyte Adhesion. Reprod Sci. 2013 Jun 11.

Flood-Nichols SK, Tinnemore D, Wingerd MA, Abu-Alya AI, Napolitano PG, Stallings JD, Ippolito DL. Beneficial effects of histone deacetylase inhibition with severe hemorrhage and ischemia-reperfusion injury. Mol Cell Proteomics. 2013 Jan;12(1):55-64.

Hammamieh R, Chakraborty N, Barmada M, Hellman H, Muhie S, Koterski J, Das R, and Marti Jett. Transcriptional profiling of human Peripheral Blood Mononuclear cells exposed to Bacillus anthracis in vitro. J. Bioterrorism and Biodefense, 2013.

Lewis, JA, Gehman EA, Baer CE, Jackson DA. Alterations in gene expression in Caenorhabditis elegans associated with organophosphate pesticide intoxication and recovery. BMC Genomics. 2013 Apr 30; 14:291.

Permenter MG, Dennis WE, Sutto TE, Jackson DA, Lewis JA, Stallings JD. Exposure to Cobalt Causes Transcriptomic and Proteomic Changes in Two Rat Liver Derived Cell Lines. PLOS ONE; 2013 Dec 30.

Rakesh V, Stallings JD, Helwig BG, Leon LR, Jackson DA, Reifman J. A 3-D mathematical model to identify organ-specific risks in rats during thermal stress. Journal of Applied Physiology. 2013 Dec 115(12):1822-37.

Satterly SA, Martin M, Wingerd M, Hempel J, Hoffer Z, Stallings JD. Flutamide fails to reduce resuscitation requirements in a porcine ischemia-reperfusion model. J Surg Res. 2013 Sep;184(1):472-9.

Shedd, T.R., M.W. Widder, and E. Hull. Hatching kit for toxicity test. U.S. Patent 8,574,603, November 5, 2013..

Valiyaveettil M, Alamneh YA, Miller SA, Hammamieh R, Arun P, Wang Y, Wei Y, Oguntayo S, Long JB, Nambiar MP. Modulation of cholinergic pathways and inflammatory mediators in blast-induced traumatic brain injury. Chem Biol Interact. 2013 Mar 25;203(1):371-5.

Yang R, Daigle BJ Jr, Muhie SY, Hammamieh R, Jett M, Petzold L, Doyle FJ 3rd. Core modular blood and brain biomarkers in social defeat mouse model for post-traumatic stress disorder. BMC Syst Biol. 2013 Aug 20;7:80. doi: 10.1186/1752-0509-7-80.


Brennan, L.M., M.W. Widder, L.E.J. Lee, W.H. van der Schalie. Long-term storage and impedance-based water toxicity testing capabilities of fluidic biochips seeded with RTgill-W1 cells. Toxicology in Vitro 26:736-745.

Dorman, D.C., V. Mokashi, D.J. Wagner, A. Olabisi, B. Wong, O. Moss, E. Fornero, J. Centeno, D. Jackson, J. Lewis and G.D. Chapman. Biological responses in rats exposed to cigarette smoke and Middle East sand (dust). Inhalation Toxicology 24:109-124.

Hammamieh R., N. Chakraborty, T.C. De Lima, J. Meyerhoff, A. Gautam, S. Muhie, P. D'Arpa, L. Lumley, E. Carroll, and M. Jett. Murine model of repeated exposures to conspecific trained aggressors simulates features of post-traumatic stress disorder. Behavioural Brain Research 235:55-66.

Rose, C, J. Abraham, D. Harkins, R. Miller, M. Morris, L. Zacher, R. Meehan, A. Szema, J. Tolle, M. King, D. Jackson, J. Lewis, A. Stahl, M. Lyles, M. Hodgson, R. Teichman, W. Salihi, G. Matiwyoff, G. Meeker, S. Mormon, K. Bird, and C. Baird. Overview and recommendations for medical screening and diagnostic evaluation for post-deployment lung disease in returning US warfighters. Journal of Occupational and Environmental Medicine 54:746-751.

Schuster, B.E., L.E. Roszell, L.E. Murr, D.A. Ramirez, J.D. Demaree, B.R. Klotz, A.B. Rosencrance, W.E. Dennis, W. Bao, E.J. Perkins, J.F. Dillman, D.I. Bannan. In vivo corrosion, tumor outcome, and microarray gene expression for two types of muscle-implanted tungsten alloys. Toxicology and Applied Pharmacology 265(1):128-138.

Shupp, J.W., L.T. Moffatt, T. Nguyen, J.C. Ramella-Roman, R. Hammamieh, S.-A. Miller, E.J. Leto, D.Y. Jo, P.R. Randad, M. Jett, J.C. Jeng, and M.H. Jordan. Examination of local and systemic in vivo responses to electrical injury using an electrical burn delivery system. Journal of Burn Care and Research, 33:118-29.


Gera, N., M. Hussain, R.C. Wright, and B.M. Rao. Highly stable binding proteins derived from the hyperthermophilic Sso7d scaffold. Journal of Molecular Biology, 409:601-16.

Morris, M.J., L.L. Zacher and D.A. Jackson. Investigating the respiratory health of deployed military personnel. Military Medicine, 176:1157-1164.

Permenter, M.G., J.A. Lewis, and D.A. Jackson. Exposure to nickel, chromium, or cadmium causes distinct changes in the gene expression patterns of a rat-liver derived cell line. PLoS ONE 6:e27730.

Porter K.L., A.W. Olmstead, D.M. Kumsher, W.E. Dennis, R.L. Sprando, G.W. Holcombe, J.J. Korte, A. Lindberg-Livingston, S.J. Degitz. Effects of 4-tert-Octylphenol on Xenopus tropicalis in a Long Term Exposure. Aquatic Toxicology 103:159-169. Epub 2011 Mar 4. ADA553581.

Trader, D.E. and W.H. van der Schalie. An evaluation of the PCB TOX SPOT water toxicity test. USACEHR Technical Report 1101, Fort Detrick, MD. ADA553637.


Alkhalil A, R. Hammamieh, J. Hardick, M.A. Ichou, M. Jett, S. Ibrahim. Gene expression profiling of monkeypox virus-infected cells reveals novel interfaces for host-virus interactions. Virology Journal, 7:173.

Chao, C-C., X. Li, R. Hammamieh, B. O'Leary, M. Jett and W-M. Ching. Identification of early response genes in human peripheral leukocytes infected with orientia tsutsugamushi: The emergent of a unique gene expression profile for diagnosis of O. tsutsugamush infection. The Open Infectious Diseases Journal, 4:16-30.

Lewis, J.A., W.E. Dennis, J. Hadix, D.A. Jackson. Analysis of secreted proteins as an in vitro model for discovery of liver toxicity markers. Journal of Proteome Research, 9:5794-5802.

Permenter, M. Exposure to nickel, chromium or cadmium causes distinct changes in the gene expression patterns of rat liver-derived cell lines. Master of Science in Environmental Biology Thesis. ADA523649.

Trader, D.E., and W.H. van der Schalie. An Evaluation of the ECLOX Chemiluminescence Test, Hach Pesticide/Nerve Agent Test Strips, and Agri-screen Test Tickets. USACEHR Technical Report 1002, Fort Detrick, MD. ADB351100.

Widder, M.W., L.M. Brennan, and W.H. van der Schalie. Electric Cell-substrate Impedance Sensing (ECIS). USACEHR Technical Report 1001, Fort Detrick, MD. ADB362705.